CTA-126B4.3

Protein-coding gene in the species Homo sapiens

RRP7A
Identifiers
AliasesRRP7A, BK126B4.3, CGI-96, CTA-126B4.3, ribosomal RNA processing 7 homolog A, Rrp7, MCPH28
External IDsMGI: 1922028; HomoloGene: 41060; GeneCards: RRP7A; OMA:RRP7A - orthologs
Gene location (Human)
Chromosome 22 (human)
Chr.Chromosome 22 (human)[1]
Chromosome 22 (human)
Genomic location for RRP7A
Genomic location for RRP7A
Band22q13.2Start42,508,344 bp[1]
End42,519,796 bp[1]
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)[2]
Chromosome 15 (mouse)
Genomic location for RRP7A
Genomic location for RRP7A
Band15|15 E1Start82,997,634 bp[2]
End83,007,002 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • mucosa of transverse colon

  • granulocyte

  • apex of heart

  • sural nerve

  • stromal cell of endometrium

  • monocyte

  • left adrenal cortex

  • anterior cingulate cortex

  • ganglionic eminence

  • body of stomach
Top expressed in
  • dentate gyrus of hippocampal formation granule cell

  • yolk sac

  • superior frontal gyrus

  • primary visual cortex

  • ventricular zone

  • neural layer of retina

  • esophagus

  • spermatocyte

  • lip

  • muscle of thigh
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • protein binding
  • nucleic acid binding
  • RNA binding
Cellular component
  • UTP-C complex
  • cytoplasm
  • CURI complex
  • nucleoplasm
Biological process
  • blastocyst formation
  • ribosomal small subunit assembly
  • rRNA processing
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

27341

74778

Ensembl

ENSG00000189306

ENSMUSG00000018040

UniProt

Q9Y3A4

Q9D1C9

RefSeq (mRNA)

NM_015703

NM_029101
NM_001358061

RefSeq (protein)

NP_056518

NP_083377
NP_001344990

Location (UCSC)Chr 22: 42.51 – 42.52 MbChr 15: 83 – 83.01 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Ribosomal RNA-processing protein 7 homolog A is a protein that in humans is encoded by the RRP7A gene.[5][6][7]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000189306 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000018040 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Lai CH, Chou CY, Ch'ang LY, Liu CS, Lin W (Aug 2000). "Identification of Novel Human Genes Evolutionarily Conserved in Caenorhabditis elegans by Comparative Proteomics". Genome Res. 10 (5): 703–13. doi:10.1101/gr.10.5.703. PMC 310876. PMID 10810093.
  6. ^ Line A, Stengrevics A, Slucka Z, Li G, Jankevics E, Rees RC (Jun 2002). "Serological identification and expression analysis of gastric cancer-associated genes". Br J Cancer. 86 (11): 1824–30. doi:10.1038/sj.bjc.6600321. PMC 2375403. PMID 12087473.
  7. ^ "Entrez Gene: CTA-126B4.3 CGI-96 protein".

Further reading

  • Nousiainen M, Silljé HH, Sauer G, et al. (2006). "Phosphoproteome analysis of the human mitotic spindle". Proc. Natl. Acad. Sci. U.S.A. 103 (14): 5391–6. Bibcode:2006PNAS..103.5391N. doi:10.1073/pnas.0507066103. PMC 1459365. PMID 16565220.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Andersen JS, Lyon CE, Fox AH, et al. (2002). "Directed proteomic analysis of the human nucleolus". Curr. Biol. 12 (1): 1–11. Bibcode:2002CBio...12....1A. doi:10.1016/S0960-9822(01)00650-9. PMID 11790298.
  • Dunham I, Shimizu N, Roe BA, et al. (1999). "The DNA sequence of human chromosome 22". Nature. 402 (6761): 489–95. Bibcode:1999Natur.402..489D. doi:10.1038/990031. PMID 10591208.


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