EP400

Protein-coding gene in humans
EP400
Identifiers
AliasesEP400, CAGH32, P400, TNRC12, E1A binding protein p400
External IDsOMIM: 606265; MGI: 1276124; HomoloGene: 38779; GeneCards: EP400; OMA:EP400 - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)[1]
Chromosome 12 (human)
Genomic location for EP400
Genomic location for EP400
Band12q24.33Start131,949,942 bp[1]
End132,080,460 bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for EP400
Genomic location for EP400
Band5|5 FStart110,812,239 bp[2]
End110,918,583 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • tendon of biceps brachii

  • sural nerve

  • secondary oocyte

  • ventricular zone

  • internal globus pallidus

  • right uterine tube

  • right hemisphere of cerebellum

  • left ovary

  • testicle

  • right ovary
Top expressed in
  • zygote

  • spermatocyte

  • seminiferous tubule

  • tail of embryo

  • ventricular zone

  • genital tubercle

  • Rostral migratory stream

  • secondary oocyte

  • spermatid

  • neural layer of retina
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • DNA binding
  • nucleotide binding
  • protein antigen binding
  • chromatin binding
  • protein binding
  • ATP binding
  • hydrolase activity
  • helicase activity
Cellular component
  • NuA4 histone acetyltransferase complex
  • nuclear speck
  • nucleus
  • Swr1 complex
  • nucleoplasm
Biological process
  • histone H2A acetylation
  • histone H4 acetylation
  • chromatin organization
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

57634

75560

Ensembl

ENSG00000183495

ENSMUSG00000029505

UniProt

Q96L91

Q8CHI8

RefSeq (mRNA)

NM_015409

NM_029337
NM_173066

RefSeq (protein)

NP_056224

NP_083613
NP_775089

Location (UCSC)Chr 12: 131.95 – 132.08 MbChr 5: 110.81 – 110.92 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

E1A-binding protein p400 is a protein that in humans is encoded by the EP400 gene.[5][6][7]

Interactions

EP400 has been shown to interact with Transformation/transcription domain-associated protein,[6] RuvB-like 1[6] and Myc.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000183495 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000029505 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Margolis RL, Abraham MR, Gatchell SB, Li SH, Kidwai AS, Breschel TS, Stine OC, Callahan C, McInnis MG, Ross CA (Jul 1997). "cDNAs with long CAG trinucleotide repeats from human brain". Hum Genet. 100 (1): 114–22. doi:10.1007/s004390050476. PMID 9225980. S2CID 25999127.
  6. ^ a b c d Fuchs M, Gerber J, Drapkin R, Sif S, Ikura T, Ogryzko V, Lane WS, Nakatani Y, Livingston DM (Aug 2001). "The p400 complex is an essential E1A transformation target". Cell. 106 (3): 297–307. doi:10.1016/S0092-8674(01)00450-0. PMID 11509179. S2CID 15634637.
  7. ^ "Entrez Gene: EP400 E1A binding protein p400".

Further reading

  • Doyon Y, Côté J (2004). "The highly conserved and multifunctional NuA4 HAT complex". Curr. Opin. Genet. Dev. 14 (2): 147–54. doi:10.1016/j.gde.2004.02.009. PMID 15196461.
  • Nagase T, Kikuno R, Ishikawa K, et al. (2000). "Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (2): 143–50. doi:10.1093/dnares/7.2.143. PMID 10819331.
  • Nagase T, Nakayama M, Nakajima D, et al. (2001). "Prediction of the coding sequences of unidentified human genes. XX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 8 (2): 85–95. doi:10.1093/dnares/8.2.85. PMID 11347906.
  • Nakayama M, Kikuno R, Ohara O (2003). "Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs". Genome Res. 12 (11): 1773–84. doi:10.1101/gr.406902. PMC 187542. PMID 12421765.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Cai Y, Jin J, Tomomori-Sato C, et al. (2003). "Identification of new subunits of the multiprotein mammalian TRRAP/TIP60-containing histone acetyltransferase complex". J. Biol. Chem. 278 (44): 42733–6. doi:10.1074/jbc.C300389200. PMID 12963728.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Doyon Y, Selleck W, Lane WS, et al. (2004). "Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans". Mol. Cell. Biol. 24 (5): 1884–96. doi:10.1128/MCB.24.5.1884-1896.2004. PMC 350560. PMID 14966270.
  • Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Chan HM, Narita M, Lowe SW, Livingston DM (2005). "The p400 E1A-associated protein is a novel component of the p53 --> p21 senescence pathway". Genes Dev. 19 (2): 196–201. doi:10.1101/gad.1280205. PMC 545875. PMID 15655109.
  • Samuelson AV, Narita M, Chan HM, et al. (2005). "p400 is required for E1A to promote apoptosis". J. Biol. Chem. 280 (23): 21915–23. doi:10.1074/jbc.M414564200. PMID 15741165.
  • Tyteca S, Vandromme M, Legube G, et al. (2006). "Tip60 and p400 are both required for UV-induced apoptosis but play antagonistic roles in cell cycle progression". EMBO J. 25 (8): 1680–9. doi:10.1038/sj.emboj.7601066. PMC 1440826. PMID 16601686.


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