GDF10

Protein-coding gene in the species Homo sapiens
GDF10
Identifiers
AliasesGDF10, BMP-3b, BMP3B, growth differentiation factor 10, BIP
External IDsOMIM: 601361; MGI: 95684; HomoloGene: 3640; GeneCards: GDF10; OMA:GDF10 - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)[1]
Chromosome 10 (human)
Genomic location for GDF10
Genomic location for GDF10
Band10q11.22Start47,300,197 bp[1]
End47,313,577 bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for GDF10
Genomic location for GDF10
Band14 B|14 20.8 cMStart33,645,544 bp[2]
End33,659,940 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • right lung

  • upper lobe of left lung

  • tibial nerve

  • tibia

  • body of pancreas

  • popliteal artery

  • tibial arteries

  • Descending thoracic aorta

  • subcutaneous adipose tissue
Top expressed in
  • calvaria

  • efferent ductule

  • body wall

  • ankle

  • lower lip

  • cerebellar vermis

  • tunica adventitia of aorta

  • lobe of cerebellum

  • internal carotid artery

  • ankle joint
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • transforming growth factor beta receptor binding
  • cytokine activity
  • growth factor activity
Cellular component
  • extracellular region
  • extracellular space
  • extracellular matrix
  • collagen-containing extracellular matrix
Biological process
  • regulation of apoptotic process
  • skeletal system development
  • positive regulation of pathway-restricted SMAD protein phosphorylation
  • regulation of MAPK cascade
  • transforming growth factor beta receptor signaling pathway
  • SMAD protein signal transduction
  • fat cell differentiation
  • cell development
  • BMP signaling pathway
  • osteoblast differentiation
  • negative regulation of osteoblast differentiation
  • ossification
  • regulation of signaling receptor activity
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2662

14560

Ensembl

ENSG00000266524

ENSMUSG00000021943

UniProt

P55107

P97737

RefSeq (mRNA)

NM_004962

NM_145741

RefSeq (protein)

NP_004953

NP_665684

Location (UCSC)Chr 10: 47.3 – 47.31 MbChr 14: 33.65 – 33.66 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Growth differentiation factor 10 (GDF10) also known as bone morphogenetic protein 3B (BMP-3B) is a protein that in humans is encoded by the GDF10 gene.[5]

GDF10 belongs to the transforming growth factor beta superfamily that is closely related to bone morphogenetic protein-3 (BMP3). It plays a role in head formation and may have multiple roles in skeletal morphogenesis.[5][6] GDF10 is also known as BMP-3b, with GDF10 and BMP3 regarded as a separate subgroup within the TGF-beta superfamily.[5]

In mice, GDF10 mRNA is abundant in the brain, inner ear, uterus, prostate, neural tissues, blood vessels and adipose tissue with low expression in spleen and liver. It is also present in bone of both adults and neonatal mice.[5] Human GDF10 mRNA is found in the cochlea and lung of foetuses, and in testis, retina, pineal gland, and other neural tissues of adults.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000266524 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000021943 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b c d Cunningham NS, Jenkins NA, Gilbert DJ, Copeland NG, Reddi AH, Lee SJ (1995). "Growth/differentiation factor-10: a new member of the transforming growth factor-beta superfamily related to bone morphogenetic protein-3". Growth Factors. 12 (2): 99–109. doi:10.3109/08977199509028956. PMID 8679252.
  6. ^ Hino J, Kangawa K, Matsuo H, Nohno T, Nishimatsu S (2004). "Bone morphogenetic protein-3 family members and their biological functions". Front Biosci. 9 (1–3): 1520–9. doi:10.2741/1355. PMID 14977563.
  7. ^ Katoh Y, Katoh M (2006). "Comparative integromics on BMP/GDF family". Int J Mol Med. 17 (5): 951–5. doi:10.3892/ijmm.17.5.951. PMID 16596286.

Further reading

  • Davila S, Froeling FE, Tan A, et al. (2010). "New genetic associations detected in a host response study to hepatitis B vaccine". Genes Immun. 11 (3): 232–8. doi:10.1038/gene.2010.1. PMID 20237496.
  • Ducy P, Karsenty G (2000). "The family of bone morphogenetic proteins". Kidney Int. 57 (6): 2207–14. doi:10.1046/j.1523-1755.2000.00081.x. PMID 10844590.
  • Grupe A, Li Y, Rowland C, et al. (2006). "A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease". Am. J. Hum. Genet. 78 (1): 78–88. doi:10.1086/498851. PMC 1380225. PMID 16385451.
  • Hino J, Takao M, Takeshita N, et al. (1996). "cDNA cloning and genomic structure of human bone morphogenetic protein-3B (BMP-3b)". Biochem. Biophys. Res. Commun. 223 (2): 304–10. doi:10.1006/bbrc.1996.0889. PMID 8670277.
  • Zhou M, Lucas DA, Chan KC, et al. (2004). "An investigation into the human serum "interactome"". Electrophoresis. 25 (9): 1289–98. doi:10.1002/elps.200405866. PMID 15174051. S2CID 42449980.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Kimura K, Toyooka S, Tsukuda K, et al. (2008). "The aberrant promoter methylation of BMP3b and BMP6 in malignant pleural mesotheliomas". Oncol. Rep. 20 (5): 1265–8. doi:10.3892/or_00000139. PMID 18949431.
  • Lafont JE, Talma S, Hopfgarten C, Murphy CL (2008). "Hypoxia promotes the differentiated human articular chondrocyte phenotype through SOX9-dependent and -independent pathways". J. Biol. Chem. 283 (8): 4778–86. doi:10.1074/jbc.M707729200. PMID 18077449.
  • v
  • t
  • e
TGF beta superfamily of ligands
Ligand of ACVR or TGFBR
Ligand of BMPR
TGF beta receptors
(Activin, BMP, family)
TGFBR1:
TGFBR2:
TGFBR3:
Transducers/SMADLigand inhibitors
CoreceptorsOther
  • v
  • t
  • e
TGFβ receptor superfamily modulators
Type I
ALK1 (ACVRL1)
  • Kinase inhibitors: K-02288
  • ML-347 (LDN-193719, VU0469381)
  • Other inhibitors: Disitertide
ALK2 (ACVR1A)
  • Kinase inhibitors: DMH-1
  • DMH-2
  • Dorsomorphin (BML-275)
  • K-02288
  • ML-347 (LDN-193719, VU0469381)
ALK3 (BMPR1A)
  • Kinase inhibitors: DMH-2
  • Dorsomorphin (BML-275)
  • K-02288
ALK4 (ACVR1B)
  • Kinase inhibitors: A 83-01
  • SB-431542
  • SB-505124
ALK5 (TGFβR1)
ALK6 (BMPR1B)
  • Kinase inhibitors: DMH-2
  • Dorsomorphin (BML-275)
  • K-02288
ALK7 (ACVR1C)
  • Antagonists: Lefty (1, 2)
  • Kinase inhibitors: A 83-01
  • SB-431542
  • SB-505124
Type II
TGFβR2
  • Kinase inhibitors: DMH-2
  • LY-364947
BMPR2
ACVR2A (ACVR2)
ACVR2B
  • Decoy receptors: Ramatercept
AMHR2 (AMHR)
Type III
TGFβR3 (β-glycan)
Unsorted


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