NSUN2

Protein-coding gene in the species Homo sapiens
NSUN2
Identifiers
AliasesNSUN2, MISU, MRT5, SAKI, TRM4, NOP2/Sun RNA methyltransferase family member 2, NOP2/Sun RNA methyltransferase 2
External IDsOMIM: 610916; MGI: 107252; HomoloGene: 9817; GeneCards: NSUN2; OMA:NSUN2 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for NSUN2
Genomic location for NSUN2
Band5p15.31Start6,599,239 bp[1]
End6,633,291 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for NSUN2
Genomic location for NSUN2
Band13 B3|13 35.55 cMStart69,681,865 bp[2]
End69,783,899 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • skin of arm

  • right uterine tube

  • secondary oocyte

  • right lobe of liver

  • skin of abdomen

  • appendix

  • skin of leg

  • lymph node

  • pancreatic epithelial cell

  • spleen
Top expressed in
  • otic placode

  • otic vesicle

  • tail of embryo

  • epiblast

  • saccule

  • Ileal epithelium

  • primitive streak

  • abdominal wall

  • genital tubercle

  • hair follicle
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • methyltransferase activity
  • transferase activity
  • tRNA binding
  • tRNA (cytosine-5-)-methyltransferase activity
  • RNA binding
Cellular component
  • cytoplasm
  • chromatoid body
  • spindle
  • nucleoplasm
  • nucleolus
  • cytoskeleton
  • nucleus
Biological process
  • tRNA methylation
  • meiotic cell cycle checkpoint signaling
  • cell division
  • tRNA modification
  • methylation
  • spermatid development
  • cell cycle
  • tRNA processing
  • hair follicle maturation
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

54888

28114

Ensembl

ENSG00000037474

ENSMUSG00000021595

UniProt

Q08J23

Q1HFZ0

RefSeq (mRNA)

NM_001193455
NM_017755

NM_145354

RefSeq (protein)

NP_001180384
NP_060225

NP_663329

Location (UCSC)Chr 5: 6.6 – 6.63 MbChr 13: 69.68 – 69.78 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

NOP2/Sun domain family, member 2 is a protein that in humans is encoded by the NSUN2 gene.[5] Alternatively spliced transcript variants encoding different isoforms have been noted for the gene.

Function

The protein is a methyltransferase that catalyzes the methylation of cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA (Leu)(CAA) precursors. This modification is necessary to stabilize the anticodon-codon pairing and correctly translate the mRNA.[5] NSUN2 is also localized on mitochondria and is capable of introducing post-transcriptional modifications in mitochondrial tRNAs.[6][7]

Clinical relevance

Mutations in this gene have been found associated to cases of Dubowitz-like syndrome.[8]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000037474 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000021595 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "NOP2/Sun domain family, member 2". Retrieved 2011-12-04.
  6. ^ Shinoda S, Kitagawa S, Nakagawa S, Wei FY, Tomizawa K, Araki K, et al. (July 2019). "Mammalian NSUN2 introduces 5-methylcytidines into mitochondrial tRNAs". Nucleic Acids Research. 47 (16): 8734–8745. doi:10.1093/nar/gkz575. PMC 6895283. PMID 31287866.
  7. ^ Van Haute L, Lee SY, McCann BJ, Powell CA, Bansal D, Vasiliauskaitė L, et al. (July 2019). "NSUN2 introduces 5-methylcytosines in mammalian mitochondrial tRNAs". Nucleic Acids Research. 47 (16): 8720–8733. doi:10.1093/nar/gkz559. PMC 6822013. PMID 31276587.
  8. ^ Martinez FJ, Lee JH, Lee JE, Blanco S, Nickerson E, Gabriel S, et al. (June 2012). "Whole exome sequencing identifies a splicing mutation in NSUN2 as a cause of a Dubowitz-like syndrome". Journal of Medical Genetics. 49 (6): 380–5. doi:10.1136/jmedgenet-2011-100686. PMC 4771841. PMID 22577224.

Further reading

  • Frye M, Dragoni I, Chin SF, Spiteri I, Kurowski A, Provenzano E, et al. (March 2010). "Genomic gain of 5p15 leads to over-expression of Misu (NSUN2) in breast cancer". Cancer Letters. 289 (1): 71–80. doi:10.1016/j.canlet.2009.08.004. PMID 19740597.
  • Hussain S, Benavente SB, Nascimento E, Dragoni I, Kurowski A, Gillich A, et al. (July 2009). "The nucleolar RNA methyltransferase Misu (NSun2) is required for mitotic spindle stability". The Journal of Cell Biology. 186 (1): 27–40. doi:10.1083/jcb.200810180. PMC 2712989. PMID 19596847.
  • Sakita-Suto S, Kanda A, Suzuki F, Sato S, Takata T, Tatsuka M (March 2007). "Aurora-B regulates RNA methyltransferase NSUN2". Molecular Biology of the Cell. 18 (3): 1107–17. doi:10.1091/mbc.E06-11-1021. PMC 1805108. PMID 17215513.
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