Protein-coding gene in the species Homo sapiens
PAFAH2 |
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Identifiers |
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Aliases | PAFAH2, HSD-PLA2, platelet activating factor acetylhydrolase 2 |
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External IDs | OMIM: 602344; MGI: 2140321; HomoloGene: 37309; GeneCards: PAFAH2; OMA:PAFAH2 - orthologs |
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Gene location (Human) |
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![Chromosome 1 (human)](//upload.wikimedia.org/wikipedia/commons/thumb/d/d6/Ideogram_human_chromosome_1.svg/300px-Ideogram_human_chromosome_1.svg.png) | Chr. | Chromosome 1 (human)[1] |
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| Band | 1p36.11 | Start | 25,959,767 bp[1] |
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End | 25,998,117 bp[1] |
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Gene location (Mouse) |
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![Chromosome 4 (mouse)](//upload.wikimedia.org/wikipedia/commons/thumb/9/9c/Ideogram_house_mouse_chromosome_4.svg/260px-Ideogram_house_mouse_chromosome_4.svg.png) | Chr. | Chromosome 4 (mouse)[2] |
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| Band | 4|4 D2.3 | Start | 134,123,631 bp[2] |
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End | 134,154,724 bp[2] |
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RNA expression pattern |
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Bgee | Human | Mouse (ortholog) |
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Top expressed in | - body of pancreas
- epithelium of colon
- granulocyte
- islet of Langerhans
- rectum
- thymus
- mucosa of transverse colon
- gastrocnemius muscle
- gonad
- muscle of thigh
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| Top expressed in | - left lobe of liver
- epithelium of stomach
- human kidney
- migratory enteric neural crest cell
- lacrimal gland
- right kidney
- proximal tubule
- Paneth cell
- transitional epithelium of urinary bladder
- Epithelium of choroid plexus
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| More reference expression data |
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BioGPS | ![](//upload.wikimedia.org/wikipedia/commons/thumb/a/ab/PBB_GE_PAFAH2_205232_s_at_fs.png/250px-PBB_GE_PAFAH2_205232_s_at_fs.png)
![](//upload.wikimedia.org/wikipedia/commons/thumb/6/61/PBB_GE_PAFAH2_205233_s_at_fs.png/250px-PBB_GE_PAFAH2_205233_s_at_fs.png) | More reference expression data |
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Gene ontology |
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Molecular function | - phospholipid binding
- hydrolase activity
- 1-alkyl-2-acetylglycerophosphocholine esterase activity
| Cellular component | - cytoplasm
- endoplasmic reticulum
- endoplasmic reticulum membrane
- membrane
| Biological process | - lipid catabolic process
- negative regulation of apoptotic process
- lipid metabolism
- blood coagulation
| Sources:Amigo / QuickGO |
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Orthologs |
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Species | Human | Mouse |
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Entrez | | |
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Ensembl | | |
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UniProt | | |
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RefSeq (mRNA) | | |
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NM_001285872 NM_001285874 NM_001285875 NM_001285877 NM_133880 |
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RefSeq (protein) | | |
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NP_001272801 NP_001272803 NP_001272804 NP_001272806 NP_598641 |
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Location (UCSC) | Chr 1: 25.96 – 26 Mb | Chr 4: 134.12 – 134.15 Mb |
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PubMed search | [3] | [4] |
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Wikidata |
View/Edit Human | View/Edit Mouse |
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Platelet-activating factor acetylhydrolase 2, cytoplasmic is an enzyme that in humans is encoded by the PAFAH2 gene.[5][6][7] It is one of several PAF acetylhydrolases.
Function
This gene encodes platelet-activating factor acetylhydrolase isoform 2, a single-subunit intracellular enzyme that catalyzes the removal of the acetyl group at the SN-2 position of platelet-activating factor (identified as 1-O-alkyl-2-acetyl-sn-glyceryl-3-phosphorylcholine). However, this lipase exhibits a broader substrate specificity than simply platelet activating factor. Two other isoforms of intracellular platelet-activating factor acetylhydrolase exist, and both are multi-subunit enzymes. Additionally, there is a single-subunit serum isoform of this enzyme.[7]
References
- ^ a b c GRCh38: Ensembl release 89: ENSG00000158006 – Ensembl, May 2017
- ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000037366 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ Hattori K, Adachi H, Matsuzawa A, Yamamoto K, Tsujimoto M, Aoki J, Hattori M, Arai H, Inoue K (Dec 1996). "cDNA cloning and expression of intracellular platelet-activating factor (PAF) acetylhydrolase II. Its homology with plasma PAF acetylhydrolase". The Journal of Biological Chemistry. 271 (51): 33032–8. doi:10.1074/jbc.271.51.33032. PMID 8955149.
- ^ Rice SQ, Southan C, Boyd HF, Terrett JA, MacPhee CH, Moores K, Gloger IS, Tew DG (Mar 1998). "Expression, purification and characterization of a human serine-dependent phospholipase A2 with high specificity for oxidized phospholipids and platelet activating factor". The Biochemical Journal. 330 ( Pt 3) (3): 1309–15. doi:10.1042/bj3301309. PMC 1219277. PMID 9494101.
- ^ a b "Entrez Gene: PAFAH2 platelet-activating factor acetylhydrolase 2, 40kDa".
Further reading
- Stafforini DM, McIntyre TM, Zimmerman GA, Prescott SM (Jul 1997). "Platelet-activating factor acetylhydrolases". The Journal of Biological Chemistry. 272 (29): 17895–8. doi:10.1074/jbc.272.29.17895. PMID 9218411.
- Umemura K, Kato I, Hirashima Y, Ishii Y, Inoue T, Aoki J, Kono N, Oya T, Hayashi N, Hamada H, Endo S, Oda M, Arai H, Kinouchi H, Hiraga K (Mar 2007). "Neuroprotective role of transgenic PAF-acetylhydrolase II in mouse models of focal cerebral ischemia". Stroke: A Journal of Cerebral Circulation. 38 (3): 1063–8. doi:10.1161/01.STR.0000257981.09329.d2. PMID 17272759.
- Schmidt EB, Koenig W, Khuseyinova N, Christensen JH (Jan 2008). "Lipoprotein-associated phospholipase A2 concentrations in plasma are associated with the extent of coronary artery disease and correlate to adipose tissue levels of marine n-3 fatty acids". Atherosclerosis. 196 (1): 420–4. doi:10.1016/j.atherosclerosis.2006.11.027. PMID 17157859.
- Unno N, Sakaguchi T, Nakamura T, Yamamoto N, Sugatani J, Miwa M, Konno H (Jul 2006). "A single nucleotide polymorphism in the plasma PAF acetylhydrolase gene and risk of atherosclerosis in Japanese patients with peripheral artery occlusive disease". The Journal of Surgical Research. 134 (1): 36–43. doi:10.1016/j.jss.2006.02.058. PMID 16650870.
- Marques M, Pei Y, Southall MD, Johnston JM, Arai H, Aoki J, Inoue T, Seltmann H, Zouboulis CC, Travers JB (Oct 2002). "Identification of platelet-activating factor acetylhydrolase II in human skin". The Journal of Investigative Dermatology. 119 (4): 913–9. doi:10.1046/j.1523-1747.2002.01859.x. PMID 12406338.
- Min JH, Wilder C, Aoki J, Arai H, Inoue K, Paul L, Gelb MH (Apr 2001). "Platelet-activating factor acetylhydrolases: broad substrate specificity and lipoprotein binding does not modulate the catalytic properties of the plasma enzyme" (PDF). Biochemistry. 40 (15): 4539–49. doi:10.1021/bi002600g. PMID 11294621.
PAFRTooltip Platelet-activating factor receptor | |
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Others | |
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- See also
- Receptor/signaling modulators
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