V-set and immunoglobulin domain containing 4

Protein-coding gene in the species Homo sapiens
VSIG4
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2ICC, 2ICE, 2ICF

Identifiers
AliasesVSIG4, CRIg, Z39IG, V-set and immunoglobulin domain containing 4
External IDsOMIM: 300353; MGI: 2679720; HomoloGene: 48515; GeneCards: VSIG4; OMA:VSIG4 - orthologs
Gene location (Human)
X chromosome (human)
Chr.X chromosome (human)[1]
X chromosome (human)
Genomic location for VSIG4
Genomic location for VSIG4
BandXq12Start66,021,738 bp[1]
End66,040,125 bp[1]
Gene location (Mouse)
X chromosome (mouse)
Chr.X chromosome (mouse)[2]
X chromosome (mouse)
Genomic location for VSIG4
Genomic location for VSIG4
BandX|X C3Start95,290,809 bp[2]
End95,337,044 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lung

  • lower lobe of lung

  • gastric mucosa

  • right coronary artery

  • right adrenal cortex

  • synovial membrane

  • upper lobe of lung

  • upper lobe of left lung

  • synovial joint

  • visceral pleura
Top expressed in
  • stroma of bone marrow

  • ankle

  • liver

  • left lobe of liver

  • myocardium of ventricle

  • tibiofemoral joint

  • granulocyte

  • muscle of thigh

  • aorta

  • skin of external ear
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • complement component C3b binding
Cellular component
  • integral component of membrane
  • membrane
  • protein-containing complex
Biological process
  • innate immune response
  • complement activation, alternative pathway
  • immune system process
  • negative regulation of interleukin-2 production
  • negative regulation of T cell proliferation
  • negative regulation of macrophage activation
  • negative regulation of complement activation, alternative pathway
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

11326

278180

Ensembl

ENSG00000155659

ENSMUSG00000044206

UniProt

Q9Y279

F6TUL9

RefSeq (mRNA)

NM_007268
NM_001100431
NM_001184830
NM_001184831
NM_001257403

NM_177789

RefSeq (protein)

NP_001093901
NP_001171759
NP_001171760
NP_001244332
NP_009199

NP_808457

Location (UCSC)Chr X: 66.02 – 66.04 MbChr X: 95.29 – 95.34 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

V-set and immunoglobulin domain containing 4 is a protein that in humans is encoded by the VSIG4 gene.[5]

Function

This gene encodes a v-set and immunoglobulin-domain containing protein that is structurally related to the B7 family of immune regulatory proteins. The encoded protein may be a negative regulator of T-cell responses. This protein is also a receptor for the complement component 3 fragments C3b and iC3b. Alternate splicing results in multiple transcript variants.

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000155659 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000044206 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: V-set and immunoglobulin domain containing 4". Retrieved 2016-06-13.

Further reading

  • Helmy KY, Katschke KJ, Gorgani NN, Kljavin NM, Elliott JM, Diehl L, Scales SJ, Ghilardi N, van Lookeren Campagne M (2006). "CRIg: a macrophage complement receptor required for phagocytosis of circulating pathogens". Cell. 124 (5): 915–27. doi:10.1016/j.cell.2005.12.039. PMID 16530040.


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This article incorporates text from the United States National Library of Medicine, which is in the public domain.