Excavata
- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
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Discoba | | | | Pharyngomonada | |
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Tetramitia | Lunosea | |
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Neovahlkampfiea | |
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Eutetramitia | |
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| Postgaardia | |
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Glycomonada | Diplonemea | |
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Kinetoplastea | - Bordnamonadidae
- Trypanophididae
| Prokinetoplastina | - Prokinetoplastida
- Ichthyobodonidae
- Perkinselidae
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Metakinetoplastina | - Neobodonida
- Allobodonidae
- Neobodonidae
- Rhynchomonadidae
- Parabodonida
- Parabodonidae
- Trypanoplasmatidae
- Bodonida
- Trypanosomatida
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Euglenida | Petalomonadea | - Petalomonadida
- Petalomonadidae
- Sphenomonadidae
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Alistosa | - Decastavida
- Decastavidae
- Keelungiidae
- Lentomonadidae
- Heterostavida
- Ploeotiida
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Entosiphonea | |
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Karavia | |
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Spirocuta | |
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| | | Anaeromonada | Anaeromonadea | - Paratrimastigida
- Trimastigida
- Oxymonadida
- Oxymonadidae
- Polymastigidae
- Pyrsonymphidae
- Saccinobaculidae
- Streblomastigidae
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| | Fornicata | |
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Parabasalia | Trichonymphea | - Trichonymphida
- †Burmanymphidae
- Hoplonymphidae
- Spirotrichosomidae
- Staurojoeninidae
- Teratonymphidae
- Trichonymphidae
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Trichomonadea | - Hexamastigidae
- Cristamonadida
- Calonymphidae
- Devescovinidae
- Hypotrichomonadida
- Spirotrichonymphida
- Trichomonadida
- Tritrichomonadida
- Dientamoebidae
- Monocercomonadidae
- Simplicimonadidae
- Tritrichomonadidae
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