WDHD1

Protein-coding gene in the species Homo sapiens
WDHD1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2D7L

Identifiers
AliasesWDHD1, AND-1, CHTF4, CTF4, AND1, WD repeat and HMG-box DNA binding protein 1, Ctf4
External IDsOMIM: 608126; MGI: 2443514; HomoloGene: 56019; GeneCards: WDHD1; OMA:WDHD1 - orthologs
Gene location (Human)
Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Chromosome 14 (human)
Genomic location for WDHD1
Genomic location for WDHD1
Band14q22.2-q22.3Start54,938,949 bp[1]
End55,027,105 bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for WDHD1
Genomic location for WDHD1
Band14|14 C1Start47,478,401 bp[2]
End47,514,314 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gonad

  • ventricular zone

  • testicle

  • ganglionic eminence

  • secondary oocyte

  • stromal cell of endometrium

  • epithelium of colon

  • mucosa of transverse colon

  • bone marrow cells

  • Achilles tendon
Top expressed in
  • otic placode

  • otic vesicle

  • primitive streak

  • saccule

  • tail of embryo

  • epiblast

  • genital tubercle

  • ventricular zone

  • secondary oocyte

  • fetal liver hematopoietic progenitor cell
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • DNA binding
  • chromatin binding
  • RNA binding
  • RNA polymerase binding
  • DNA-binding transcription factor activity, RNA polymerase II-specific
Cellular component
  • cytoplasm
  • nucleus
  • nucleoplasm
  • chromosome, centromeric region
  • replication fork protection complex
  • nuclear replication fork
Biological process
  • RNA processing
  • regulation of chromosome organization
  • regulation of transcription by RNA polymerase II
  • mitotic cell cycle
  • DNA-dependent DNA replication
  • DNA repair
  • cellular response to DNA damage stimulus
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

11169

218973

Ensembl

ENSG00000198554

ENSMUSG00000037572

UniProt

O75717

P59328

RefSeq (mRNA)

NM_001008396
NM_007086

NM_172598
NM_001360532

RefSeq (protein)

NP_001008397
NP_009017

NP_766186
NP_001347461

Location (UCSC)Chr 14: 54.94 – 55.03 MbChr 14: 47.48 – 47.51 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

WD repeat and HMG-box DNA binding protein 1 is a protein in humans that is encoded by the WDHD1 gene. [5]

The protein encoded by this gene contains multiple N-terminal WD40 domains and a C-terminal high mobility group (HMG) box. WD40 domains are found in a variety of eukaryotic proteins and may function as adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly. HMG boxes are found in many eukaryotic proteins involved in chromatin assembly, transcription and replication. Alternative splicing results in two transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008].

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000198554 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000037572 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: WD repeat and HMG-box DNA binding protein 1". Retrieved 2013-02-18.

Further reading


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