Protein-coding gene in the species Homo sapiens
GNGT2 |
---|
|
Identifiers |
---|
Aliases | GNGT2, G-GAMMA-8, G-GAMMA-C, GNG8, GNG9, GNGT8, G protein subunit gamma transducin 2, HG3I |
---|
External IDs | OMIM: 139391; MGI: 893584; HomoloGene: 11325; GeneCards: GNGT2; OMA:GNGT2 - orthologs |
---|
Gene location (Human) |
---|
| Chr. | Chromosome 17 (human)[1] |
---|
| Band | 17q21.32 | Start | 49,202,791 bp[1] |
---|
End | 49,210,574 bp[1] |
---|
|
Gene location (Mouse) |
---|
| Chr. | Chromosome 11 (mouse)[2] |
---|
| Band | 11 D|11 59.01 cM | Start | 95,728,042 bp[2] |
---|
End | 95,736,560 bp[2] |
---|
|
RNA expression pattern |
---|
Bgee | Human | Mouse (ortholog) |
---|
Top expressed in | - granulocyte
- monocyte
- spleen
- lymph node
- blood
- appendix
- mucosa of transverse colon
- smooth muscle tissue
- right lung
- gallbladder
|
| Top expressed in | - neural layer of retina
- granulocyte
- thymus
- yolk sac
- embryo
- right kidney
- spleen
- muscle of thigh
- interventricular septum
- esophagus
|
| More reference expression data |
|
---|
BioGPS | | More reference expression data |
|
---|
|
Gene ontology |
---|
Molecular function | - signal transducer activity
- GTPase activity
- G-protein beta-subunit binding
| Cellular component | - heterotrimeric G-protein complex
- plasma membrane
- membrane
- G-protein beta/gamma-subunit complex
| Biological process | - G protein-coupled receptor signaling pathway
- signal transduction
- phototransduction
| Sources:Amigo / QuickGO |
|
Orthologs |
---|
Species | Human | Mouse |
---|
Entrez | | |
---|
Ensembl | | |
---|
UniProt | | |
---|
RefSeq (mRNA) | |
---|
NM_001198754 NM_001198755 NM_001198756 NM_031498 |
| |
---|
NM_001038664 NM_001284393 NM_001284397 NM_023121 |
|
---|
RefSeq (protein) | |
---|
NP_001185683 NP_001185684 NP_001185685 NP_113686 |
| |
---|
NP_001033753 NP_001271322 NP_001271326 NP_075610 |
|
---|
Location (UCSC) | Chr 17: 49.2 – 49.21 Mb | Chr 11: 95.73 – 95.74 Mb |
---|
PubMed search | [3] | [4] |
---|
|
Wikidata |
View/Edit Human | View/Edit Mouse |
|
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2 is a signalling protein protein that in humans and vertebrates is encoded by the GNGT2 gene.[5][6][7] Either GNGT1 or GNGT2 is the gamma subunit of the Gβγ part of transducin (written G(T) or Gt), a heterotrimeric G-protein naturally expressed in vertebrate retina rod and cone cell of the eye, where it is thought to play a crucial role in phototransduction. GNGT2 only occurs in cone cells, and GNGT1 only occurs in rod cells.
As the gamma subunit (Gγ) of three different families of G proteins (G(I)/Gi, G(S)/Gs and G(O)Go), GNGT2 is expressed in at least 23 tissues[8] and other cell types, including monocytes of the vertebrate innate immune system, where at increased levels it has been shown to be a potential prognostic marker for some types of cancer, including esophageal cancer.[9]
Several transcript variants encoding the GNGT2 protein have been found for the GNGT2 gene. There is evidence for use of multiple polyadenylation sites by this gene.[6]
References
- ^ a b c GRCh38: Ensembl release 89: ENSG00000167083 – Ensembl, May 2017
- ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000038811 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ Ong OC, Hu K, Rong H, Lee RH, Fung BK (Nov 1997). "Gene structure and chromosome localization of the G gamma c subunit of human cone G-protein (GNGT2)". Genomics. 44 (1): 101–9. doi:10.1006/geno.1997.4814. PMID 9286705.
- ^ a b "Entrez Gene: GNGT2 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2".
- ^ "GNGT2 Gene search NCBI". National Center for Biotechnology Information. 2024-02-18. Retrieved 2024-02-18.
vertebrates (410)
- ^ "GNGT2 G protein subunit gamma transducin 2 [Homo sapiens (Human)] - Gene - NCBI".
- ^ Liu, GM; Ji X, X; Lu TC, TC; Duan, LW (2019-12-28). "Comprehensive multi-omics analysis identified core molecular processes in esophageal cancer and revealed GNGT2 as a potential prognostic marker". World J. Gastroenterol. 25 (48): 6890–6901. doi:10.3748/wjg.v25.i48.6890. PMC 6938725. PMID 31908393.
Further reading
- Cohen NA, Sha Q, Makhina EN, et al. (1997). "Inhibition of an inward rectifier potassium channel (Kir2.3) by G-protein betagamma subunits". J. Biol. Chem. 271 (50): 32301–5. doi:10.1074/jbc.271.50.32301. PMID 8943291.
- Huang CL, Jan YN, Jan LY (1997). "Binding of the G protein betagamma subunit to multiple regions of G protein-gated inward-rectifying K+ channels". FEBS Lett. 405 (3): 291–8. doi:10.1016/S0014-5793(97)00197-X. PMID 9108307. S2CID 44072628.
- Cook LA, Schey KL, Cleator JH, et al. (2002). "Identification of a region in G protein γ subunits conserved across species but hypervariable among subunit isoforms". Protein Sci. 10 (12): 2548–55. doi:10.1110/ps.ps.26401. PMC 2374038. PMID 11714923.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Cuello F, Schulze RA, Heemeyer F, et al. (2003). "Activation of heterotrimeric G proteins by a high energy phosphate transfer via nucleoside diphosphate kinase (NDPK) B and Gbeta subunits. Complex formation of NDPK B with Gbeta gamma dimers and phosphorylation of His-266 IN Gbeta". J. Biol. Chem. 278 (9): 7220–6. doi:10.1074/jbc.M210304200. PMID 12486123.
- Ivanina T, Rishal I, Varon D, et al. (2003). "Mapping the Gbetagamma-binding sites in GIRK1 and GIRK2 subunits of the G protein-activated K+ channel". J. Biol. Chem. 278 (31): 29174–83. doi:10.1074/jbc.M304518200. PMID 12743112.
- Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
- DePuy SD, Yao J, Hu C, et al. (2006). "The molecular basis for T-type Ca2+ channel inhibition by G protein β2γ2 subunits". Proc. Natl. Acad. Sci. U.S.A. 103 (39): 14590–5. Bibcode:2006PNAS..10314590D. doi:10.1073/pnas.0603945103. PMC 1600004. PMID 16973746.
| This article on a gene on human chromosome 17 is a stub. You can help Wikipedia by expanding it. |